Muhammad Junaid Ali Asif Raja

Machine Learning ResearcherNational Yunlin University of Science and Technology

Muhammad Junaid Ali Asif Raja

Direct PhD Student

Dept. of CS & IE, YunTech

Yunlin, Taiwan

I am Muhammad Junaid Ali Asif Raja, a Machine Learning Researcher at the National Yunlin University of Science and Technology (YunTech), Taiwan, advised by Prof. Chuan-Yu Chang and mentored by Prof. Muhammad Asif Zahoor Raja.

I am a Direct PhD student, having transitioned from the Master’s program in September 2025. I hold a Bachelor’s degree in Electrical Engineering from SEECS, NUST, Islamabad, where I was advised by Prof. Faisal Shafait and Prof. Adnan Ul-Hasan, and affiliated with the TUKL-DLL Lab, NCAI.

I am working on Fractional Deep Learning. I build intelligent neural surrogates, mostly data-driven autoregressive emulators, for fractional-order nonlinear dynamical systems, and my thesis designs surrogate networks that reconstruct the dynamics of neuronal systems. A related thread uses fractional calculus to improve deep learning optimization, with the goal of faster large language model training.

I have authored 30 publications, 27 of them indexed in the WoS Core Collection, in journals such as Chaos, Solitons & Fractals, Water Research, IEEE Transactions on Computational Biology and Bioinformatics, Nonlinear Dynamics, and Engineering Applications of Artificial Intelligence. I am a member of the Phi Tau Phi Scholastic Honor Society (top 2% of graduate master’s students).

I also maintain zij (companion site, GitHub), a reference library for deep learning optimizers; its catalogue covers 740 methods across 11 categories, with 100+ implemented in an accompanying PyTorch library.

Research Interests

  • Fractional-order accelerated gradient descent algorithms with applications in computer vision (biomedical) and recommender systems
  • Fractional-calculus-inspired quasi and pseudo-fractional optimization algorithms for large language model training
  • Intelligent physics-informed and data-driven neural surrogates for fractional-order differential systems, including:
    • Neuronal dynamics and chaotic attractors (Hindmarsh-Rose, FitzHugh-Nagumo, Rabinovich-Fabrikant)
    • Ecological and environmental systems (plankton dynamics)
    • Malware propagation in cyber-physical and SCADA systems
    • Computational fluid dynamics

news

Jul 22, 2026 milestone My Google Scholar profile reached an h-index of 10, an i10-index of 10, and 221 citations. Thanks to my collaborators and readers.
Jun 19, 2026 release Released zij, a canon of deep learning optimization algorithms covering 740 methods across 11 categories, with 100+ implemented as a PyTorch library. Its research arm develops fractional-calculus-inspired optimization algorithms. See the companion website or the source on GitHub.
May 29, 2026 milestone Crossed the 200+ citation milestone on Google Scholar. Thanks to my collaborators and readers.
May 12, 2026 paper Paper on fractional delay differential malware propagation in Industrial IoT systems accepted at Chaos, Solitons & Fractals: the first intelligent neural surrogate for this class of models.
Mar 18, 2026 student Congratulations to Shahzaib Ahmed Hassan on the acceptance of his paper on intelligent neural surrogates for the Lorenz-Lu-Chen system in the International Journal of Computer Mathematics.
Mar 06, 2026 student Congratulations to Shehzada Taimur, Shahzaib Ahmed Hassan, and Sannan Zia Abbasi on the acceptance of their paper in Chaos, Solitons & Fractals: a hybrid neural-computational paradigm for fractional-order locally active memristive neuronal models.
Oct 15, 2025 paper Published in Water Research (2026): neuro-computational surrogates for aqueous fractional-order nekton-plankton spatiotemporal dynamics, the group’s second paper in this journal. Congratulations to Adil Sultan.
Oct 01, 2025 paper Paper accepted at Nonlinear Dynamics: stochastic backpropagative ARX neuroarchitectures for fractional-order Rabinovich-Fabrikant chaotic attractors. Congratulations to Shahzaib Ahmed Hassan and Syed Zoraiz Ali Sherazi.

selected publications

  1. Chaos Solit.
    A Novel Design of Time Delay Fractional Nonlinear SIHQR Worm Transmission Model for Industrial IoT Networks: Machine Learning Knowledge Driven Neuroarchitecture Analysis
    A Novel Design of Time Delay Fractional Nonlinear SIHQR Worm Transmission Model for Industrial IoT Networks: Machine Learning Knowledge Driven Neuroarchitecture Analysis
    Kiran Asma, Muhammad Asif Zahoor Raja, Muhammad Junaid Ali Asif Raja, Chi-Min Shu, Muhammad Ali Kiani, and Muhammad Shoaib
    Chaos, Solitons & Fractals, 2026
  2. Chaos Solit.
    A Hybrid Intelligent Computational Framework for Diverse Firing Patterns in a Fractional-Order Locally Active Memristive Neuron Model
    A Hybrid Intelligent Computational Framework for Diverse Firing Patterns in a Fractional-Order Locally Active Memristive Neuron Model
    Shehzada Taimur, Muhammad Asif Zahoor Raja, Muhammad Junaid Ali Asif Raja, Shahzaib Ahmed Hassan, Sannan Zia Abbasi, Adiqa Kausar Kiani, Muhammad Shoaib, and Chi-Min Shu
    Chaos, Solitons & Fractals, 2026
  3. Water Res.
    Neuro-Computational Surrogates for Aqueous Fractional-Order Nekton-Plankton Spatiotemporal Dynamics Under Toxicant Stress, Refuge Efficacy, and Nutrient Flux Modulation
    Neuro-Computational Surrogates for Aqueous Fractional-Order Nekton-Plankton Spatiotemporal Dynamics Under Toxicant Stress, Refuge Efficacy, and Nutrient Flux Modulation
    Adil Sultan, Chuan-Yu Chang, Muhammad Junaid Ali Asif Raja, Adiqa Kausar Kiani, Muhammad Shoaib, and Muhammad Asif Zahoor Raja
    Water Research, 2026
  4. IEEE TCBB
    Stochastic-Deterministic Modeling of Immune Responses and Tumor Evolution Under Therapeutic Influence: Intelligent Predictive Supervised Exogenous Networks
    Stochastic-Deterministic Modeling of Immune Responses and Tumor Evolution Under Therapeutic Influence: Intelligent Predictive Supervised Exogenous Networks
    Hassan Raza, Muhammad Junaid Ali Asif Raja, Rikza Mubeen, Zaheer Masood, and Muhammad Asif Zahoor Raja
    IEEE Transactions on Computational Biology and Bioinformatics, 2025
  5. Nonlinear Dyn.
    Design of Stochastic Backpropagative Autoregressive Exogenous Neuroarchitectures for Predictive Analysis of Fractional-Order Nonlinear Rabinovich-Fabrikant Chaotic Attractors
    Design of Stochastic Backpropagative Autoregressive Exogenous Neuroarchitectures for Predictive Analysis of Fractional-Order Nonlinear Rabinovich-Fabrikant Chaotic Attractors
    Shahzaib Ahmed Hassan, Muhammad Junaid Ali Asif Raja, Syed Zoraiz Ali Sherazi, Chuan-Yu Chang, Chi-Min Shu, Adiqa Kausar Kiani, Zeshan Aslam Khan, Muhammad Shoaib, and Muhammad Asif Zahoor Raja
    Nonlinear Dynamics, 2025
  6. Chaos Solit.
    A Hybrid Neural-Computational Paradigm for Complex Firing Patterns and Excitability Transitions in Fractional Hindmarsh-Rose Neuronal Models
    A Hybrid Neural-Computational Paradigm for Complex Firing Patterns and Excitability Transitions in Fractional Hindmarsh-Rose Neuronal Models lead
    Muhammad Junaid Ali Asif Raja, Shahzaib Ahmed Hassan, Chuan-Yu Chang, Chi-Min Shu, Adiqa Kausar Kiani, Muhammad Shoaib, and Muhammad Asif Zahoor Raja
    Chaos, Solitons & Fractals, 2025
  7. Appl. Soft Comput.
    Design of Deep Learning Networks for Nonlinear Delay Differential System for Stuxnet Virus Spread in an Air-Gapped Critical Environment
    Design of Deep Learning Networks for Nonlinear Delay Differential System for Stuxnet Virus Spread in an Air-Gapped Critical Environment lead
    Muhammad Junaid Ali Asif Raja, Zaheer Masood, Ijaz Hussain, Aneela Zameer, and Muhammad Asif Zahoor Raja
    Applied Soft Computing, 2025
  8. Eng. Appl. AI
    Bayesian-Regularized Cascaded Neural Networks for Fractional Asymmetric Carbon-Thermal Nutrient-Plankton Dynamics Under Global Warming and Climatic Perturbations
    Bayesian-Regularized Cascaded Neural Networks for Fractional Asymmetric Carbon-Thermal Nutrient-Plankton Dynamics Under Global Warming and Climatic Perturbations lead
    Muhammad Junaid Ali Asif Raja, Adil Sultan, Chuan-Yu Chang, Chi-Min Shu, Adiqa Kausar Kiani, and Muhammad Asif Zahoor Raja
    Engineering Applications of Artificial Intelligence, 2025
  9. Water Res.
    Design of a Fractional-Order Environmental Toxin-Plankton System in Aquatic Ecosystems: A Novel Machine Predictive Expedition with Nonlinear Autoregressive Neuroarchitectures
    Design of a Fractional-Order Environmental Toxin-Plankton System in Aquatic Ecosystems: A Novel Machine Predictive Expedition with Nonlinear Autoregressive Neuroarchitectures lead
    Muhammad Junaid Ali Asif Raja, Adil Sultan, Chuan-Yu Chang, Chi-Min Shu, Muhammad Shoaib, Adiqa Kausar Kiani, and Muhammad Asif Zahoor Raja
    Water Research, 2025
  10. Biomed. Signal
    Design of Intelligent Bayesian-Regularized Deep Cascaded NARX Neurostructure for Predictive Analysis of FitzHugh-Nagumo Bioelectrical Model in Neuronal Cell Membrane
    Design of Intelligent Bayesian-Regularized Deep Cascaded NARX Neurostructure for Predictive Analysis of FitzHugh-Nagumo Bioelectrical Model in Neuronal Cell Membrane lead
    Muhammad Junaid Ali Asif Raja, Shahzaib Ahmed Hassan, Chuan-Yu Chang, Chi-Min Shu, Adiqa Kausar Kiani, Muhammad Shoaib, and Muhammad Asif Zahoor Raja
    Biomedical Signal Processing and Control, 2025